species:   Artha
pid:       MI0019249
parent:    ath-MIR5661
paralog:   
locus:     4:10449329-10449409
matures:   ['AGAGGUACAUCAUGUAGUCUG', 'UGCUGCAUUGUCUACUUCUGU']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 4:10449329-10449409

0 out of bounds
8 alignments
3 proper strand
2 stranded perfect matches

***********************                                   ***********************
UAAGAGGUACAUCAUGUAGUCUGAAAUGGUUUUGCUGUACUCUUUGCUUCUGACAUUUCUUGCUGCAUUGUCUACUUCUGU
..(((((((.((.(((((((..((((((.....((..........))......))))))..))))))).)).)))))))..
--AGAGGUACAUCAUGUAGUCUG---------------------------------------------------------- l=21 a=0 c
------------------------------------------------------------UGCUGCAUUGUCUACUUCUGU l=21 a=0 c*
--------------------------------UGCUGUACUCUUUGCUUCUGACAUUUCUUGCUGCAU------------- l=36 a=1 ma
------------------------------------------------------------UGCUGCAUUGUCUACUUCUGU l=21 a=0 ma*

--------------------------------UGCUGUACUCUUUGCUUCUGACAUUUCUUGCUGCAU------------- l=36 a=1 (ma)
-----------------------------------------------UUCUGACAUUUCUUGCUGCAUU------------ l=22 a=1 
-----------------------------------------------UUCUGACAUUUCUUGCUGCAUc------------ l=22 a=1 

mb-00010
ax-1011001
ku-01
ss-110010001100
fn-001
